SMPDB is offered to the public as a freely available resource. Use and re-distribution of the data, in whole or in part,
for commercial purposes requires explicit permission of the authors and explicit acknowledgment of the source material (SMPDB)
and the original publication (see below). We ask that users who download significant portions of the database cite the SMPDB
paper in any resulting publications.
- Wishart DS, Frolkis A, Knox C, et al.,
SMPDB: The Small Molecule Pathway Database.
Nucleic Acids Res. 2010 Jan;38(Database issue):D480-7.
Protein/Gene Sequences (in FASTA Format):
Pathway Enzyme Sequences
Structure Files (in SDF Format):
Pathway Map Component Structures
|Metabolite names linked to SMPDB pathways (includes KEGG and ChEBI IDs)
|Drug names linked to SMPDB pathways
|Protein names linked to SMPDB pathways (includes UniProt IDs)
|Pathways linked to the reference material (in Textile Format) used to build the pathway
This project is supported by Genome Alberta &
Genome Canada, a not-for-profit organization that is leading
Canada's national genomics strategy with $600 million in funding from the federal government.